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Do you have a biological question that could be readily answered by computational techniques, but little experience in programming? Do you want to learn more about the core techniques used in computational biology and bioinformatics? Written in an accessible style, this guide provides a foundation for both newcomers to computer programming and those interested in learning more about computational biology. The chapters guide the reader through: a complete beginners' course to programming in Python, with an introduction to computing jargon; descriptions of core bioinformatics methods with working Python examples; scientific computing techniques, including image analysis, statistics and machine learning. This book also functions as a language reference written in straightforward English, covering the most common Python language elements and a glossary of computing and biological terms. This title will teach undergraduates, postgraduates and professionals working in the life sciences how to program with Python, a powerful, flexible and easy-to-use language.

• Sales Rank: #1348957 in Books
• Published on: 2015-04-06
• Original language: English
• Number of items: 1
• Dimensions: 9.72" h x 1.30" w x 6.85" l, 2.43 pounds
• Binding: Paperback
• 711 pages

Review
"As a long-time advocate of Python as the language of choice for both the bulk of biological data analysis and for teaching computer programming to molecular life scientists, I am delighted to see this book. [It] provides a well-focused introduction to Python programming but then goes on to use the clarity of the Python language to demystify a wide range of commonly applied data processing and analysis techniques that arise in modern cell and molecular biology. The integration of straightforward introductions to sequence analysis, image processing and statistical analysis (amongst others) into a book on Python is inspired. The clarity of the Python language helps to show that often 'yes it really is that simple', in a way that staring at a mathematical expression often fails to, and the programming element allows the reader to become actively involved."
Jeremy Craven, University of Sheffield

"Python Programming for Biology is an excellent introduction to the challenges that biologists and biophysicists face. The choice of Python is appropriate; we use it in most research in our laboratories at the interface between biology, biochemistry and bioinformatics. The book takes us through programming principles for a beginner with a biological background, introducing the basics. It has useful tips for improving code and some specific examples, for example in sequence analysis, macromolecular structures, image processing and databases. I was pleased to see that there is a substantive section on machine learning which in the era of 'big data' is becoming central to much of the software developed for biomedical and agri-biotech research."
Tom Blundell, University of Cambridge

"Stevens and Boucher tear down barriers to programming and bioinformatics, for biologists and medics alike ... this is the book that I wish I could have read years ago. Serving as both a straightforward tutorial and plain-English reference, the key programming, biology and bioinformatics concepts necessary to build programs for practical, real-world applications are explained in a logical and easy-to-follow order, helping the reader to get from zero to results faster. Unlike many programming books and resources, information is presented in the right amount of detail and jargon is demystified, giving a gentle but thorough and practical introduction to programming with Python, while providing useful tips and encouraging good practices. This introduction is built on with 'from the ground up' explanations of basic, intermediate and advanced computational biology methodologies through Python implementations, resulting in a well-rounded text for programming to solve biological challenges."
Harry Jubb, University of Cambridge

"As an increasingly valuable and important skill, programming can be daunting for those new to it. Python Programming for Biology provides the perfect introduction into the world of coding. Stevens and Boucher gently guide the reader through the basics and into practical examples that will aid the reader into incorporating Python into their research activities. I would not hesitate to recommend it as a valuable teaching aide or to people keen to expand their horizons into bioinformatics."
David Ascher, University of Cambridge

"Python has become a programming and scripting language of utmost importance in scientific computing, in particular in biology. Major, widely used software packages make use of Python, and libraries offering powerful functionalities are available. Many if not most research projects in biology benefit from computational techniques. Although it is incredibly simple to write small scripts in Python, for a novice in programming, the first steps may seem daunting. In contrast to many other books on Python, this book is specifically aimed at an audience that has little or no experience with programming. After a step-by-step introduction to programming in Python, it describes concrete examples from different areas in biology, with code examples from data analysis to modelling. [It] is a highly valuable addition to the literature on Python, and recommended to any biologist who is interested in using computers in his research."
Michael Nilges, Institut Pasteur, France

"[Stevens and Boucher's] understanding of the needs of the target audience for this book (primarily bench scientists with minimal programming experience) is complete. They have accurately customized the book, to meet those specific requirements which are so distinct from those of students aspiring to be specialist programmers. They have achieved this difficult objective without 'dumbing down' the content or omitting any relevant aspect of Python. The book provides an easy and comprehensive introduction for the complete novice as well as offering plenty to engage the more experienced reader. This work is exactly what is required for us to build new training events upon."
David Judge, University of Cambridge

About the Author
Tim Stevens is Senior Investigator Scientist at the MRC Laboratory of Molecular Biology in Cambridge. He researches single-cell 3D genome architecture and provides computational biology oversight, development and training within the Cell Biology Division.

Wayne Boucher, a mathematician and theoretical physicist by training, is a senior postdoctoral associate and computing technician for the Department of Biochemistry at the University of Cambridge. He teaches undergraduate mathematics and postgraduate programming courses, and is currently developing software for the analysis of biological molecules by nuclear magnetic resonance spectroscopy.

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Audible Audiobook

Listening Length: 8 hours and 54 minutes

Program Type: Audiobook

Version: Unabridged

Publisher: HarperAudio

Audible.com Release Date: February 5, 2013

Whispersync for Voice: Ready

Language: English, English

ASIN: B00A2ZHDO4

Amazon Best Sellers Rank:

This is an awesome book that dives into the challenges and issues that plague our past, present and possibly our future education system. It paints a haunting image of what we as a coutry are doing to our young people and what we are setting them up for.

She kept my attention by telling her story and interweaving her philosophies. She makes compelling arguments. She left a few arguments unaddressed but overall a good read.

Excellent real world practical application from experience. Me and my wife read it and applied many of the principles to the raising of our two children both are in college and doing very well. I totally recommend this book and any other Michelle Rhee has written. She is the absolute truth. TKCAL

This is how education should be handled. Look what she accomplished! But obviously not politically correct for the sub-standard employees that lost there job.

This book should be retitled: Michelle Rhee: The Autobiography. The book traces Michelle's rise from a scrappy youth to a hard edge executive of StudentsFirst. Along the way she provides humorous anecdotes and praises those who have helped her along the way. It's all good stuff but that's an autobiography not a book about putting students first. I assume she wrote this book from the angle of "let me tell my story and people will see how the system works without being preachy" but she doesn't provide to much details and raises as many questions on school reform as she answers.The most notably lack of info comes from the funding for her pay for performance program. To not mention who the contributors were that made this possible but Rhee notes where her husband proposed makes this an autobiography not a book about school reform. That's a glaring omission.Other questions dealt mostly with lack of detail on curriculum beyond math and reading. For example:By seventh grade my school had team teaching with individual teachers responsible for Reading, English, and Math - we also had History, Foreign Language, and Science. How does pay for performance work for teachers who's classes aren't captured in nationwide testing? What does the curriculum look like and how is the class day divided between these subject areas? What about high school teachers?For a self-proclaimed data wonk so didn't see to grasp that test score fluctuations from one year to another could be a statistical anomaly so I was confused as to why a bonus would be paid off a one year result vs. multi-year trending. What if a teacher's students perform really well in their final year before retirement raising the teachers pension base salary then the same class takes a dive the following year? There's bad teachers out there - which teachers do you think are more likely to game the system and teach to a test for a potential bonus?I pulled back and wondered if we even have a problem with education in America? I looked at the OECD/PISA rankings and three of the Top Ten aren't even countries. One is a city/state. Two are quasi city/states. Only two are "real" countries comparable to the US: South Korea and Japan...which are two countries education models I would never want to see copied in the US. After those Top Ten it's not a huge drop between the major European countries to the US but all of those countries do not have the income inequality that we have in the US. So is the real issue that we have more poor people taking the test than Germany? Is this a chicken and egg debate that: education lifts the poor, poor struggle with education? How do you break the cycle? Michelle Rhee states with great teachers and to attract them you need to pay them more...that makes sense but her decision to use "charities" to fund the gap between the higher costs and tax revenue should be a red flag.So to solve a problem we may or may not have America's wealthiest citizens have decided to lend assistance...Let me see if I understand this correctly...the family of one of the most despicable companies in America, Walmart, refuses to pay its employees a living wage, thus limiting their upward mobility and lowering their tax base to fund adequately schools in their home communities, and in some cases leads to a single parent to get a second job which prevents the parent from being home with the child to assist with homework, etc., has decided to create a personal charity, that when they make a contribution helps to lower their effective tax rate to less than mine, and then use this charity to "contribute" to local politicians so that schools teach children, who aren't their's, what they think should be learned, without any input from local citizens or in some cases a notification of the changes that will be coming. Is that correct?So Walmart heirs want us to reach other industrial nations' standards of education but when it comes to matching similar standards for worker's rights, wage equality, job security, and time off, etc. they'll preach "free-market" and that they are applying the same "free-market" principles to education in America. Since when has "free-market" meant the buy-off of politicians to write the rules of the economy in your favor and send tax dollars to private companies?...oh right since the early 1980s. And how was that turned out for the American worker? So how do you think "free-market" education will turn out for the American student?

As a teacher I feel books like this are important to read, even if you don't agree with everything Rhee has to say. It's personal, political, educational, and a good conversation started for people vested in education.

I totally agree with Ms. Rhee's assessment of Public Education, and mostly agree with her recommendations of action for change. However, this book is more autobiographical (and self-serving) than I expected, and so the "OK" rating. Read the last two chapters; skip the rest!

The first half of the book is pretty engaging. The struggles associated with the government run educational monopoly. It loses steam about two thirds of the way through and becomes a little slow. Overall I would give it a moderate recommendation, higher if you have school age children.

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• Sales Rank: #3059969 in Books
• Brand: Brand: Springer
• Published on: 2013-11-22
• Original language: English
• Number of items: 1
• Dimensions: 9.25" h x .60" w x 6.10" l, .82 pounds
• Binding: Paperback
• 246 pages

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• Sales Rank: #3999119 in Books
• Brand: Brand: All America Distributors Corp
• Published on: 1991-06
• Original language: English
• Number of items: 1
• Dimensions: 7.00" h x 4.25" w x .75" l,
• Binding: Paperback
• 312 pages

• Used Book in Good Condition

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Donald Goines (1936-1974) was a career criminal and addict who took up writing during one of his seven prison sentences. Between 1969 and 1974, he published sixteen novels, which are now recognized as almost unbearably authentic portraits of the roughest aspects of the black experience.

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• Sales Rank: #73285 in Books
• Brand: Mills, Criss B.
• Published on: 2011-02-02
• Original language: English
• Number of items: 1
• Dimensions: 10.75" h x .66" w x 8.28" l, 1.40 pounds
• Binding: Paperback
• 288 pages

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• Sales Rank: #262294 in Books
• Brand: Brand: Living Language
• Published on: 2004-11-16
• Released on: 2004-11-16
• Formats: Large Print, Unabridged
• Original language: English
• Number of items: 1
• Dimensions: 9.20" h x .90" w x 6.15" l, 1.20 pounds
• Binding: Paperback
• 384 pages

• Used Book in Good Condition

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• Sales Rank: #14988037 in Books
• Published on: 2006-05-01
• Original language: English
• Number of items: 1
• Dimensions: 2.10" h x 6.20" w x 9.00" l, 2.30 pounds
• Binding: Paperback

Basic Reading Skills Handbook [With Dictionary]By Harvey S. Wiener, Charles Bazerman PDF
Basic Reading Skills Handbook [With Dictionary]By Harvey S. Wiener, Charles Bazerman EPub
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Basic Reading Skills Handbook [With Dictionary]By Harvey S. Wiener, Charles Bazerman PDF

Basic Reading Skills Handbook [With Dictionary]By Harvey S. Wiener, Charles Bazerman PDF

Basic Reading Skills Handbook [With Dictionary]By Harvey S. Wiener, Charles Bazerman PDF

Basic Reading Skills Handbook [With Dictionary]By Harvey S. Wiener, Charles Bazerman PDF